PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91403.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 219aa    MW: 24454.2 Da    PI: 10.7997
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-124899255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                +  h  +Er+RR+++ s +  Lr++lP  +    ++K s ++ + +Av YIk+Lq
  OWM91403.1 48 KIIHRDVERQRRQEMASLYRSLRSHLPLeL---LKGKRSTSDHVHQAVGYIKNLQ 99
                56699***********************77...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MFAPLPPSRN VLATADLQGS PTPVDPLSTP QGAASVEGDP IENSKKRKII HRDVERQRRQ  60
EMASLYRSLR SHLPLELLKG KRSTSDHVHQ AVGYIKNLQN KIQELSRKRD ELKRAPQLNK  120
TDDPKTFKGL PRTRRQVILS IKPCIGGEEI IISTDSRHGV ALSKVLGFLT LEGMNVTSCT  180
SVKVNGRLLH SVKSEVIRDD GNHTTNPSQL KQKLMNLLH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14659KRKIIHRDVERQRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-36bHLH family protein