PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM91439.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 249aa    MW: 28721.2 Da    PI: 6.507
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM91439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.13.7e-09145185954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +Kl+ a++L +A++Y+k L
  OWM91439.1 145 ARHRRERISEKIRILQRLVPGG-----TKLDTASMLDEAIRYVKFL 185
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDFNQSKFTN NSWDDHHQHH PHLDHHIAME EQILHDHHHH HHLPLTALPQ FSSFPDFQTN  60
DQHHQHEFTP SLTQLIIPTG SILSGEHVGN QVVEDEDEPE DELGPMKEMM YKIAAMQPVD  120
IDPATIRKPK RRNVRISDDP QSVAARHRRE RISEKIRILQ RLVPGGTKLD TASMLDEAIR  180
YVKFLKRQIR MLQLNQNTPT SPMFKTGLPS FLSTSSSMGA ETESRFDFRV SCVDDASFCF  240
NNSEVISHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.13e-47bHLH family protein