PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000018.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 781aa    MW: 85073.7 Da    PI: 5.2627
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000018.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS330.24e-1014207792374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +++L+++ e v+ gdl laq++Larl+++ sp+g+p++R+a+y +eAL+  ++++ +++ ++ ++ + s    + ++ a+k fse+sP+++f+++t+N
  Oeu000018.2 420 IDQLYKATELVQMGDLILAQEILARLNHQLSPTGKPFHRAAFYCKEALQLIIHNNNNTIPSSATAPHFS---LIFKIGAYKSFSEISPLVQFANFTCN 514
                  689***************************************************766666666666665...9************************* PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL..r 195
                  qa+le +eg  r+Hi+Dfdi++G+QW++L+q+La R++g+psl+iT++ sp+++++ el+ t+e+L +fA+e++v +ef+v+  + l+    ++L  +
  Oeu000018.2 515 QALLEVLEGFGRIHIVDFDIGYGGQWASLMQELALRSDGAPSLKITAFTSPSTHDQLELSLTRENLIHFANEINVALEFEVMSIDYLN-SGSWSLpfQ 611
                  *********************************************************************************7555444.446776558 PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  v++ Ea+aVnl +     +  ++s+    + vL++vk+lsPk+vv v++ +d+ + +F +++++al+ ys l++sl+a    ++++  ++Er+ll++ 
  Oeu000018.2 612 VSESEAIAVNLPVGSLASY--QLSV----PLVLRFVKHLSPKIVVSVDRGCDRIDLPFPNHIIHALQSYSNLLESLDAV-NVNTDTLPNIERFLLQPG 702
                  888*********9766666..4444....55*********************************************665.45789999********** PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++++v+ + ++     e+ ++Wr  + ++GF+p+++s+++++qa++++++++++g++ve+++ slvl+W++++L+s+SaWr
  Oeu000018.2 703 LEKIVMGRFRA----PEKTQHWRTLFLSSGFSPITFSNFTESQAECVVKRTPVRGFNVEKRQSSLVLCWQRKELISASAWR 779
                  ******98887....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 781 aa     Download sequence    
MKGMPLPFEF EGKGVDLELL VFNNNNFRAN SPWWESNNLN DNCFLNSCSE PASVLDIASS  60
PSGAISISSS TLSSSLGGGV DIAGGGAAST DTAGVAAVPG NNEKNPSLKW RQDSTTATSS  120
NTGVDSELLP VPPSLEIGTA TTGTSAGKCA MDEWESVFSE SAVASPSQEQ SILRWIMGDV  180
DDPEISLNKV LQFGTAPPPP MAESEFNGGF GVVDQAFGAD TVGQIGSNFG HDSSSPSNRS  240
NSEKIGLFSN SSSNQSNISK FPNSQNNIFS SVPNNLGPVT TPFGFAEMEA PIFTPQMLVN  300
HQNQHPQNPS FFLPLPYANQ QEQNPFKPPQ AKRHNPGAVG KGLEPDGQIQ KGQFSVPGQE  360
LLMGRQLQQQ QPMSHQFQLL PHYLQQRPPA AMGPGSKPKI GGDDLAYCHQ QQQQQQQAII  420
DQLYKATELV QMGDLILAQE ILARLNHQLS PTGKPFHRAA FYCKEALQLI IHNNNNTIPS  480
SATAPHFSLI FKIGAYKSFS EISPLVQFAN FTCNQALLEV LEGFGRIHIV DFDIGYGGQW  540
ASLMQELALR SDGAPSLKIT AFTSPSTHDQ LELSLTRENL IHFANEINVA LEFEVMSIDY  600
LNSGSWSLPF QVSESEAIAV NLPVGSLASY QLSVPLVLRF VKHLSPKIVV SVDRGCDRID  660
LPFPNHIIHA LQSYSNLLES LDAVNVNTDT LPNIERFLLQ PGLEKIVMGR FRAPEKTQHW  720
RTLFLSSGFS PITFSNFTES QAECVVKRTP VRGFNVEKRQ SSLVLCWQRK ELISASAWRC  780
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-144GRAS family protein