PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000040.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family B3
Protein Properties Length: 165aa    MW: 18996.9 Da    PI: 10.1136
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000040.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-169741484
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
           B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84
                 +  vlpk f+++++++k    +l   ++   +We++l  r+++++++l+kGW++Fv++++L +gD+vvF+l
  Oeu000040.1  9 CGQVLPKAFCRNINHVK----KLATITSGKGVWEINL-CRRNRDTVFLEKGWSDFVRQHDLTVGDIVVFEL 74
                 5679******9999885....4555667888******.5888889************************96 PP
2B362.18.8e-20741491690
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                  l++p kf +++g+++++   + l+d+sg++W v+l+++k++ +    ++ +GWk+F ++n+Lk g +++F+l+++ e+
  Oeu000040.1  74 LRIPAKFWKSNGLNEKT--SVNLRDPSGKKWPVELKFDKNGTSyhrLIMLRGWKQFYESNKLKNGNVCTFELNHNPEG 149
                  79***********9655..6*****************99999987855556*********************998554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MYSFFHLICG QVLPKAFCRN INHVKKLATI TSGKGVWEIN LCRRNRDTVF LEKGWSDFVR  60
QHDLTVGDIV VFELRIPAKF WKSNGLNEKT SVNLRDPSGK KWPVELKFDK NGTSYHRLIM  120
LRGWKQFYES NKLKNGNVCT FELNHNPEGS TVASMDVHIE RAPN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-09B3 family protein