PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000049.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 325aa    MW: 36473.1 Da    PI: 5.8487
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000049.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-131863146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W +eEde l++ v+++G+++W++I ++  + Rt+k+c++rw +
      Oeu000049.2 18 KGPWKAEEDEVLINHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 63
                     79*************************8887799**********87 PP
2Myb_DNA-binding431.1e-1374113344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      ++++eE+   +d+  q+G++ W++Ia +++ gRt++++k++w
      Oeu000049.2  74 KFSAEEERTVIDLQGQFGNK-WAKIATYLP-GRTDNDVKNFW 113
                      79******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MNGRGRMLCD DTGMIIKKGP WKAEEDEVLI NHVNKYGPRD WSSIRSKGLL QRTGKSCRLR  60
WVNKLRPNLK NGVKFSAEEE RTVIDLQGQF GNKWAKIATY LPGRTDNDVK NFWSSRQKRL  120
ARILQTSAPS CNKSRKNKEI QVPLLDGVPY LEAPKFSLST EEESIIKSQS SSSSYIDYSE  180
TIKMVPLQGL VYSGSLNFEQ SPFQLEFTPA IDKKSYEEQQ LQLCFPQIPQ LQSDYSLSLE  240
SQDFITRLGD PNFYDVFGQG SGTELGNGPF PILPSCFGPD GGSQTTGQGE NHNAVTPDSF  300
IDDFPPMDMF NHLDPLPSPS QWLV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.15e-78MYB family protein