PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000106.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 333aa MW: 37835.4 Da PI: 7.6804

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000106.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl Oeu000106.1 14 KGLWSPEEDEKLIHHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	46.7	7.3e-15	67	109	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ Oeu000106.1 67 RGTFSPEEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWN 109 899*****************.*****.*******998 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLIHHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SPEEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS SIKKKLRQKG 120 IDPNTHKPLS EVEDKGNPSS VGFDHEFFLN RFVASHETST TSCRNSDLPG LLSFQHLSYG 180 PNTTNLYFNS NSTTSSMSSN PVLPLIVEPS TIIKPTMNPP LDNSISPFGL NKFQNMDFFE 240 NNIFSWGRGK SEKLESHIHS SEDDIPQDIK WNEYLQTPVL LDNSIQNQTH FATEDSVSSD 300 NWHSNQLQKP LQSAEIYSKH FQMLPASFGQ FS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	1e-102	MYB family protein