PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000125.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 531aa MW: 55968.4 Da PI: 7.3578

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000125.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	127.3	1.6e-39	140	251	3	93
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 + k+ ++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++t+eWLlqqa+pai+++tgt++++a+++ + s +ss+s s++ Oeu000125.1 140 PPKKVTKDRHTKVDGRGRRIRMPAVCAARVFQLTRELGHKSDGETVEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSILSAPptksaphsfhg 237 56899***************************************************************999877777777773333333334455555 PP TCP 89 .........kaaks 93 +++ s Oeu000125.1 238 alglthhpyEENFS 251 55566655422222 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MELKDSRNNK QQINSTTAAA STSPSGGATT SANYYLTPSH HLLQRLHPQQ QYQHGQSPPF 60 ITNSSAAGAT GGASSSSTSS SSTATTSAST SSTIQPPNLV DASLAIATGS ETLVDSSKRS 120 QNQLQITGQP QEQQVQTQQP PKKVTKDRHT KVDGRGRRIR MPAVCAARVF QLTRELGHKS 180 DGETVEWLLQ QAEPAIIAAT GTGTIPANFS TLNISLRSSG SILSAPPTKS APHSFHGALG 240 LTHHPYEENF SQMLGFRHQQ QQQTPHLLQA AQIAESLASG SGGGRGDGGG AGGGGQEANE 300 DYLHKRYRED LFKEEGTNNS QGEGSDSPSH KQFKGNNLQI IQKSQESPAA GQSPPSLIRH 360 TNMVPATAMW AVAPAPSSVT TAGGGAFWML PFTSGGNGQA LTATSTSGTA AGPSDTPQMW 420 PFSTAACGNT LQTPLQFMPR FNYPGNLEFQ GGRASPLQLG SMLMQQQQTP SQYLGLNVSG 480 ETNLGMLAAL NAYSRGGLNM NSDRQSHHPF EHQQQPQDTE SGEDGQNASQ *

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MELKDSRNNK QQINSTTAAA STSPSGGATT SANYYLTPSH HLLQRLHPQQ QYQHGQSPPF  60
ITNSSAAGAT GGASSSSTSS SSTATTSAST SSTIQPPNLV DASLAIATGS ETLVDSSKRS  120
QNQLQITGQP QEQQVQTQQP PKKVTKDRHT KVDGRGRRIR MPAVCAARVF QLTRELGHKS  180
DGETVEWLLQ QAEPAIIAAT GTGTIPANFS TLNISLRSSG SILSAPPTKS APHSFHGALG  240
LTHHPYEENF SQMLGFRHQQ QQQTPHLLQA AQIAESLASG SGGGRGDGGG AGGGGQEANE  300
DYLHKRYRED LFKEEGTNNS QGEGSDSPSH KQFKGNNLQI IQKSQESPAA GQSPPSLIRH  360
TNMVPATAMW AVAPAPSSVT TAGGGAFWML PFTSGGNGQA LTATSTSGTA AGPSDTPQMW  420
PFSTAACGNT LQTPLQFMPR FNYPGNLEFQ GGRASPLQLG SMLMQQQQTP SQYLGLNVSG  480
ETNLGMLAAL NAYSRGGLNM NSDRQSHHPF EHQQQPQDTE SGEDGQNASQ *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	290	GGGRGDGGG
2	283	291	GGGRGDGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	6e-68	TCP family protein