PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000157.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 631aa    MW: 70896 Da    PI: 6.5568
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000157.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.8e-1875190198
                  EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE.................EEETTEEEE-TTHHHHHHHHT--T CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy...............rkksgryvltkGWkeFvkangLke 76 
                  f+k+lt sd++++g +++ +++a+++       +++    ++l  +d++g +W +++i+               +++++r++lt+GW+ Fv+ ++L +
  Oeu000157.1  75 FCKTLTASDTSTHGGFSVLRRHADDClpqldmsQQP--PWQELAATDLHGHEWHFRHIFrarfsrratifvfpdSGQPRRHLLTTGWSVFVSTKKLVA 170
                  99****************************964333..4458***************99999999999999999999999****************** PP

                  T-EEEEEE-SSSEE..EEEEE- CS
           B3  77 gDfvvFkldgrsefelvvkvfr 98 
                  gD ++F   + +++el+v+v+r
  Oeu000157.1 171 GDAFIFL--RGENGELRVGVRR 190
                  *******..449999*****97 PP
2Auxin_resp117.21.3e-38216298183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  a+ha+st++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vg++d d++rWp+S+WrsLk
  Oeu000157.1 216 ASHAISTGTLFSVYYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGLEDNDSSRWPDSEWRSLK 298
                  789******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    
MEQLEASTQQ GLDQQLPSFN LPAKILCKVM YVHLRAEPET DEVYAQITLV PEQQTEITSP  60
DPPPPEPQRS TVHSFCKTLT ASDTSTHGGF SVLRRHADDC LPQLDMSQQP PWQELAATDL  120
HGHEWHFRHI FRARFSRRAT IFVFPDSGQP RRHLLTTGWS VFVSTKKLVA GDAFIFLRGE  180
NGELRVGVRR LMKHLNNMPS SVISSHSMHL GVLATASHAI STGTLFSVYY KPRTSRSEFI  240
VSVNKYLEAR SHKLSVGMRF KMRFEGEEVP ERRFSGTIVG LEDNDSSRWP DSEWRSLKVQ  300
WDEPASVLRP DRVSPWEIEP FVATTPPNSQ PPQRNKRARP PILPSPMQDL SSLGMWKSPA  360
DSSSAFSCCD PSRGRDVHQS PRFSSGTRVS NLSYNEIMPP VSSNLIYRSN QVENAIESFT  420
PVSEKRQANG CRLFGIELRD SSTVEDTALA VVSGVAKEDS LIPALGDESE KNSEPSNHNP  480
SDVPLESFEP EKSCTRSPHE PKSRQIRSCT KVHMQGIAVG RAVDLTKFDG YDDLLKKFET  540
MFEIEGELCG SRKKWKVVYT DDEDDMMMVG DDPWHEFCTI VRKIYIYTIE EAKKLSPKIK  600
LPLPEVKPGK LVADAAISSE EQSSTMGSDY *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein