PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000477.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 283aa    MW: 31193.8 Da    PI: 7.1192
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000477.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.22.2e-133731070
     trihelix 10 Liearr..........emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                 Liea++            +e++++gk  + +W++v +++++ g+ rs +qC++kw+nl +++kk++e +++
  Oeu000477.1  3 LIEAKKmdderrlmirHGGESSSSGKPGELRWKRVEDYCWKNGCLRSHNQCNDKWDNLMRDFKKVREYQRR 73
                 666666322222222233344445679999************************************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MVLIEAKKMD DERRLMIRHG GESSSSGKPG ELRWKRVEDY CWKNGCLRSH NQCNDKWDNL  60
MRDFKKVREY QRRVAVAGGD GGGEKSYWKI DKNERKEHSL PSNMLPQIFD ALVQVMERKS  120
QAEMVGGSGG GGVIVPAAEA QTMLLPLQPP AQAPTRPFAE PSFPTVDSDT SEHSESPAKR  180
RRRSGERGGD GGDGAVGGGS LQEVCSAISQ SGSTIAEAIQ SSEEREERRH REVLSLHERR  240
LQIEESNAEI NRQGINGIVD AINKLANSML DLASQKNQPE SK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-43Trihelix family protein