PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu000620.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 277aa MW: 31717.9 Da PI: 6.7707

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu000620.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.9e-18	73	126	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Oeu000620.1 73 KKRRLNMDQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 126 4568999**********************************************9 PP
2	HD-ZIP_I/II	130.6	6.3e-42	72	164	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ +qvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdye+Lkr+++a+k++n++L++++++L++e+++ Oeu000620.1 72 EKKRRLNMDQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKRQFEAVKTDNDSLQAQNQKLQAEIMA 164 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MAFFPANFML QTRNEDEHQP STSLNPILPH CNPQEFHGVV SLEGKRSSMF PDVCEENHGE 60 DYMSDDGLQV GEKKRRLNMD QVKTLEKNFE LGNKLEPERK MQLARALGLQ PRQIAIWFQN 120 RRARWKTKQL EKDYEVLKRQ FEAVKTDNDS LQAQNQKLQA EIMALKKREP TELINLNKEM 180 EGSCSNRSEN SCDIKLDISR TPANGSPLST HPSTRPLFAP SMRPNGAAQL FQASCRPAIQ 240 CQKPEQTVKD ESFCSMLCGM DDQTGFWPWL DQQHFS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	129	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-108	HD-ZIP family protein