PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000671.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family DBB
Protein Properties Length: 295aa    MW: 31805.2 Da    PI: 4.3304
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000671.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box231.6e-07542639
     zf-B_box  6 CpeHeekelqlfCedCqqllCedClleeHkg....Htv 39
                 C+ +++ +++ +C+++   lC +C  + H+     H++
  Oeu000671.1  5 CEFCGKDRAIVYCKSDAASLCLSCDRNVHSAnalsHRH 42
                 ****************************9667888554 PP
2zf-B_box20.69.3e-074684439
     zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg...Htv 39
                  +C+++++++++  C + ++ lC++C    H+g   H++
  Oeu000671.1 46 LVCERCNSQPVSVRCIKERVSLCQSCDWIAHRGshaHER 84
                 68*************************999*88966665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGYLCEFCGK DRAIVYCKSD AASLCLSCDR NVHSANALSH RHSRTLVCER CNSQPVSVRC  60
IKERVSLCQS CDWIAHRGSH AHERQEVNCY SGCPSAAELS VIWSFLLNLP TFCDSTCEQE  120
TGSLSITGSR LKDCQSAEGD NNIQDSSIAV GENCLRNEDV DIATVSMEST MPSLNPKVNN  180
AEKLTGSSNS SMQKGFFCGT KGSALCDDGG FYDDFNMDEG DLNIENYEEY FGADVDNTGK  240
LFDNDGIDAL FATKDMSCSN CHSASAAEVI PSNGSALSSL SLCYCDFACS SFTT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.22e-66CO-like family protein