PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000868.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 210aa    MW: 23321.3 Da    PI: 9.0381
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000868.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.41.2e-311468358
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 k rYk+ClkNhA+ +GghavDGCgEf+++ geeg+ +alkCaAC+CHRnFHRre+e
  Oeu000868.1 14 KPRYKDCLKNHAVGIGGHAVDGCGEFIAA-GEEGSLDALKCAACNCHRNFHRRETE 68
                 579*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MPSPIETAVT PLRKPRYKDC LKNHAVGIGG HAVDGCGEFI AAGEEGSLDA LKCAACNCHR  60
NFHRRETEVG AAFALHHHQN QQQQLLLTNH PHGHFSYRSP SGYLHVAHPQ QQRLPLALPS  120
SSGGGGSGSG DELEDYYSNP SASAGKKRFR TKFTQEQKDK MLNLAERLGW KIQKEDEELV  180
QQFCNEVGIR RHVLKVWMHN NKHTLGKKT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-63ZF-HD family protein