PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000879.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 309aa    MW: 34468.8 Da    PI: 6.0976
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000879.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-14106157155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i+  A++++k+L+
  Oeu000879.1 106 QRMTHIAVERNRRRQMNDYLAILRSLMPPS---YAQRGDQASIVGGAINFVKELE 157
                  79****************************...*******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MALEAVVFQQ DPFSYADWKD YCNMGDYSFD LGIQDQRPNT EQISNGYWDS TPSSIAQSSS  60
PEICAGQGIF SSGEYSSMVD PAVDTTSQCK RRRTKSSKNK EEIENQRMTH IAVERNRRRQ  120
MNDYLAILRS LMPPSYAQRG DQASIVGGAI NFVKELEQLL QSLEAYNVAK KQHYTSISTH  180
SHLFSRFFTF PQYSTYPTRH GNSTAGSSAC DMAEKRSAVA DIEVTMVENH ANIKILSGKL  240
PKQILKLVTG LQSISLTVLH LNITTIEQLV LYSISVKVED DCQLSTVTVI ANAVHDMLEI  300
IQEEARSS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107118RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.11e-83bHLH family protein