PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu000926.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 27812.7 Da    PI: 8.6631
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu000926.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.72.4e-31959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva++ifs++gklye++s
  Oeu000926.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALVIFSNRGKLYEFCS 59
                 79***********************************************96 PP
2K-box91.31.7e-308216913100
        K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                    es ++e+ kLk+++e+Lqr qRh+lG++L++L++++L++Le qLe+slk+iRs++++++l+q+++lq kek++ e+n+aL++klee
  Oeu000926.1  82 RLESNYREYLKLKSKYESLQRYQRHVLGDELGPLNINDLEHLEYQLETSLKHIRSTRTQVMLDQLSDLQAKEKMMVETNTALERKLEE 169
                  568899*******************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALVIFSN RGKLYEFCST  60
SNMLKTLERY QKMNLACNAM YRLESNYREY LKLKSKYESL QRYQRHVLGD ELGPLNINDL  120
EHLEYQLETS LKHIRSTRTQ VMLDQLSDLQ AKEKMMVETN TALERKLEEI YVANHAQQSW  180
GVGEQSCAYG QQHPQSQAFF QPLECNSTLQ IGYSNPGSSS QMTAINTDVQ NVNGLLPGWM  240
L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-103MIKC_MADS family protein