PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001093.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 393aa MW: 43804 Da PI: 6.9864

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001093.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.8	3.2e-17	44	104	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++ +eq++ Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Oeu001093.1 44 KPRWNPRPEQIRMLEAIFNSgMVNPPRDEIRKIRAQLqqygQVGDANVFYWFQNRKSRSKQ 104 89***************99***********************************996 PP
2	Wus_type_Homeobox	110	1.3e-35	43	105	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi++Le++++sG+++P+++ei++i+a+L++yG+++d+NVfyWFQNrk+R++qk Oeu001093.1 43 PKPRWNPRPEQIRMLEAIFNSGMVNPPRDEIRKIRAQLQQYGQVGDANVFYWFQNRKSRSKQK 105 689***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MASSNRNWPS LFKSKPKWQH ESTGCHRTPY TSVPGYEERT PEPKPRWNPR PEQIRMLEAI 60 FNSGMVNPPR DEIRKIRAQL QQYGQVGDAN VFYWFQNRKS RSKQKNRQLH KTKSQTHTTT 120 ASISPLSDKS PPNNSTEKVI FSVGYTGSME VSNSPSGSAN QSIFQTPSEF VAEPYFFPMQ 180 QSPSTAAFTE GFCFPDVSDH VIDHTDGNCC SNLLFSELML MNHEPSKKAN QNDHENMKLQ 240 QLLNYSVTRA PTSTHSVNVF PPTPCVPSPK NHIQGVVESG GGGSTKSTVF INDVCFEVAV 300 GELFNIREAF GDDAVLMHSS GQPVLTNELG LTLQPLHHGA FYYLVRAFTD PSSADERTIE 360 LTSWRGTIVP PKIEPSDCRG NMVELDLPSN TF*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MASSNRNWPS LFKSKPKWQH ESTGCHRTPY TSVPGYEERT PEPKPRWNPR PEQIRMLEAI  60
FNSGMVNPPR DEIRKIRAQL QQYGQVGDAN VFYWFQNRKS RSKQKNRQLH KTKSQTHTTT  120
ASISPLSDKS PPNNSTEKVI FSVGYTGSME VSNSPSGSAN QSIFQTPSEF VAEPYFFPMQ  180
QSPSTAAFTE GFCFPDVSDH VIDHTDGNCC SNLLFSELML MNHEPSKKAN QNDHENMKLQ  240
QLLNYSVTRA PTSTHSVNVF PPTPCVPSPK NHIQGVVESG GGGSTKSTVF INDVCFEVAV  300
GELFNIREAF GDDAVLMHSS GQPVLTNELG LTLQPLHHGA FYYLVRAFTD PSSADERTIE  360
LTSWRGTIVP PKIEPSDCRG NMVELDLPSN TF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-69	WOX family protein