PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001279.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 703aa MW: 77046.7 Da PI: 7.4376

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001279.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75	8.9e-24	112	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ + +++ + t++ +d +g++W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + +++ l Oeu001279.2 112 FAKTLTQSDANNGGGFSVPRYCAETIfprldyMADPPLQ-TVIAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAENGDL 206 89***************************96666664.9********************************************..4488889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ Oeu001279.2 207 CIGIRRA 213 **996 PP
2	Auxin_resp	112.3	4.8e-37	277	357	4	83
Auxin_resp 4 aastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a+++++FevvY+Pr+st+eF+vk+++v++++++++++GmRfkmafetedss++++ +Gt+++v+ +dp+ WpnS Wr+L+ Oeu001279.2 277 LAASGQPFEVVYYPRTSTPEFCVKAASVSASMRIRWCPGMRFKMAFETEDSSRISWfMGTIASVQVADPICWPNSLWRLLQ 357 6899***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MKEAVEKTLD SELWHACAGG MVQMPSVNSN IFYFPQGHAE HALIHVDFTT LPRVAPMFLC 60 RVAAVKYLAD PETDEVYAKI RLIPIENNKH SFEDDGSLGS NGSEVNEKPT SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPR LDYMADPPLQ TVIAKDVHGE TWKFRHIYRG TPRRHLLTTG 180 WSTFVNQKKL VAGDSIVFLR AENGDLCIGI RRAKRSGGFG GHEAPSGWYS SGAGNLGGFS 240 AFLKEDQNKL MHKGGNNENL SERGRVKPES VVNATLLAAS GQPFEVVYYP RTSTPEFCVK 300 AASVSASMRI RWCPGMRFKM AFETEDSSRI SWFMGTIASV QVADPICWPN SLWRLLQVKW 360 DEPDLLQNVK CVSPWLVELV SNMPVIHLSP FSPPRKKLCL PHHSDFPIDG HFPMPSFSGK 420 PIGPSSPFSC LSDTISAGIQ GARHVQIGVP LTDLRLSNKL QLGLLPPNVL HLDPHAKTSD 480 DIGGSRMDGN ENISCLLSMG SSSKKSEKMD HIITPRFVLF GQPILTEQQM SLVCSSDAVY 540 KVSSVRGSSG GTPFKSENSV SDQPGTPKSL SNAQFLWKPG CHAAELGLDT GHCKVFLESE 600 DVGRTLDLSV LGSYEELYKR LEHMFGIEKT EIVNHVFYSD AAGGVRQTGD EPFSEFMKTA 660 KRLTIFGRPG SQSAERKLIT GVPTAERGLD SCNRAGPMSI FA*

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MKEAVEKTLD SELWHACAGG MVQMPSVNSN IFYFPQGHAE HALIHVDFTT LPRVAPMFLC  60
RVAAVKYLAD PETDEVYAKI RLIPIENNKH SFEDDGSLGS NGSEVNEKPT SFAKTLTQSD  120
ANNGGGFSVP RYCAETIFPR LDYMADPPLQ TVIAKDVHGE TWKFRHIYRG TPRRHLLTTG  180
WSTFVNQKKL VAGDSIVFLR AENGDLCIGI RRAKRSGGFG GHEAPSGWYS SGAGNLGGFS  240
AFLKEDQNKL MHKGGNNENL SERGRVKPES VVNATLLAAS GQPFEVVYYP RTSTPEFCVK  300
AASVSASMRI RWCPGMRFKM AFETEDSSRI SWFMGTIASV QVADPICWPN SLWRLLQVKW  360
DEPDLLQNVK CVSPWLVELV SNMPVIHLSP FSPPRKKLCL PHHSDFPIDG HFPMPSFSGK  420
PIGPSSPFSC LSDTISAGIQ GARHVQIGVP LTDLRLSNKL QLGLLPPNVL HLDPHAKTSD  480
DIGGSRMDGN ENISCLLSMG SSSKKSEKMD HIITPRFVLF GQPILTEQQM SLVCSSDAVY  540
KVSSVRGSSG GTPFKSENSV SDQPGTPKSL SNAQFLWKPG CHAAELGLDT GHCKVFLESE  600
DVGRTLDLSV LGSYEELYKR LEHMFGIEKT EIVNHVFYSD AAGGVRQTGD EPFSEFMKTA  660
KRLTIFGRPG SQSAERKLIT GVPTAERGLD SCNRAGPMSI FA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein