PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001594.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 281aa    MW: 32221.3 Da    PI: 6.1784
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001594.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.77.3e-1773125456
                  -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  ++++ ++q++ Le+ F+  +++ +e++ +LAk++gL+ rqV +W+qNrRa++k
  Oeu001594.1  73 KRRLLPDQVQFLEKSFAVGNKLETERKIQLAKQTGLQPRQVAIWYQNRRARYK 125
                  4567899*********************************************9 PP
2HD-ZIP_I/II118.15e-3871162192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrl  +qv++LE+sF   +kLe+erK +la++ glqprqva+W+qnrRAR+ktkq+Ekdy++Lk++yd+lk+++++L ke+e+L++e++
  Oeu001594.1  71 EKKRRLLPDQVQFLEKSFAVGNKLETERKIQLAKQTGLQPRQVAIWYQNRRARYKTKQMEKDYNSLKATYDKLKADHDSLFKENEKLENEVR 162
                  69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MTSVLLKNEK LPCSSNVLDS LLIPCSSASF HGSTSIVNFE DVHRENLTDK PFFDKEENGS  60
EDYDECFRKL EKKRRLLPDQ VQFLEKSFAV GNKLETERKI QLAKQTGLQP RQVAIWYQNR  120
RARYKTKQME KDYNSLKATY DKLKADHDSL FKENEKLENE VRLLKEKLLQ REKGKPKSEP  180
CDPTSPLWAG SEQNKPLPSF ALPKASNLPM VICKQEDATS AKSDVFDLES PRYNDGIRSS  240
FLEPSDSLHI FDSDFSQDKD DNLSRSLMPP PCFAKREDEC *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120128RRARYKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-38HD-ZIP family protein