PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001638.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 516aa MW: 55904.6 Da PI: 5.4661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001638.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27	7.8e-09	339	386	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Oeu001638.1 339 SHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 386 8***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MDMAGEDASI EPKIMSSQWQ LNINNLTNTS IVINPTSNSN VESSACSSNS MADSICPPIW 60 NQPVSGQSLG YCDMIVENNT STSNTLGNGT SSIIPVRPNA ILRESTFLRD FPVILPSSLP 120 HLPADSGFIE RAARFSCFGG GNFVDMMNPF RMSESLNPYT RDLASEGPLE VLAGKGSKSL 180 PVMQTQTHEM NAIERSMEVP LPVEQGTEGS SIKNDKMIEH FPSSHDEAIF GIGLSAHEFA 240 EAEFSGSGIQ GELEDDAGES SAKELGSKKR KRTGQSNNGS RQAANETAMD HAEIQQQGYQ 300 NRASSKPCGK HDKPGSQGSD LPKEEYIHVR ARRGQAINSH SLAERVRREK ISERMKFLQD 360 LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLSTVN PRLDFNIEGL LAKEPRAGPP 420 SSLAFSSCVT MPYPPLHQSQ TGIIQAVLPG LGSFSGPLQG SVNPQLTTVG GRFKESTSQV 480 HCAWEDELCN IIQMGFTSND HLNGQNFGGH LKSEL*

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MDMAGEDASI EPKIMSSQWQ LNINNLTNTS IVINPTSNSN VESSACSSNS MADSICPPIW  60
NQPVSGQSLG YCDMIVENNT STSNTLGNGT SSIIPVRPNA ILRESTFLRD FPVILPSSLP  120
HLPADSGFIE RAARFSCFGG GNFVDMMNPF RMSESLNPYT RDLASEGPLE VLAGKGSKSL  180
PVMQTQTHEM NAIERSMEVP LPVEQGTEGS SIKNDKMIEH FPSSHDEAIF GIGLSAHEFA  240
EAEFSGSGIQ GELEDDAGES SAKELGSKKR KRTGQSNNGS RQAANETAMD HAEIQQQGYQ  300
NRASSKPCGK HDKPGSQGSD LPKEEYIHVR ARRGQAINSH SLAERVRREK ISERMKFLQD  360
LVPGCSKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLSTVN PRLDFNIEGL LAKEPRAGPP  420
SSLAFSSCVT MPYPPLHQSQ TGIIQAVLPG LGSFSGPLQG SVNPQLTTVG GRFKESTSQV  480
HCAWEDELCN IIQMGFTSND HLNGQNFGGH LKSEL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	268	273	KKRKRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.1	1e-85	bHLH family protein