PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu001780.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 152aa    MW: 17269.7 Da    PI: 10.1955
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu001780.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-105092554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 h   Er RR+++++ f++L+  lP+         +K++i+ +Av++I++L
  Oeu001780.1 50 HTWTERERRKKMRDMFANLQAFLPPK-------TDKSTIVDEAVNHIRML 92
                 6668********************97.......7**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MKKKPEKKKG TDTESSPPPA TRKKRVAADK DGGDQLNKES GGDDLDHEIH TWTERERRKK  60
MRDMFANLQA FLPPKTDKST IVDEAVNHIR MLPKTIEKLE KQKHEELATK PGETVLADEG  120
SSKNNLPPLM PQTHFHSHRF PSFFRHGLLL I*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1725KKKGTDTESSPPPATRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.15e-24bHLH family protein