PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu001995.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 412aa MW: 45491.5 Da PI: 7.7857

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu001995.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	80.1	2.3e-25	108	210	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+ltpsd+++ g +++p+ +a+++ +++ + l+++d++++ W++++iyr++++r+++t+GW++Fv++++L +gD+vvF++++ s++e Oeu001995.1 108 FAKILTPSDSNNGGGFSVPRFCADSIfplldlsAEPPVQ--NLVIKDSQNNAWKFRHIYRGTPRRHLITTGWSRFVNSKRLVAGDSVVFMRKK-STGE 202 89*******************999986555555..6********************************************655.9999 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+v+++r+ Oeu001995.1 203 LFVGIRRA 210 ****96 PP
2	Auxin_resp	83.3	5.3e-28	250	333	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+++++FevvY+Pr++ ++Fvv++ekve++l+ +svGmR+kma+etedss++++ Gt+++++ + v +S+Wr+L+ Oeu001995.1 250 AIETAEKGMAFEVVYYPRTGIPDFVVSTEKVEDSLSFCWSVGMRVKMAVETEDSSRTTWfLGTISSMTSSGGVPGGDSPWRMLE 333 5678999**************************************************9********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSAYATHTDP SIWRATAGAA VEIPTVNSRV YYFPQGHLEH SSPVRNNNIL LKTHLISCQV 60 LDVSLLSDSS FDQPFAKLSL LPLQSHGQHV ITDNVEKREL DESDVVSFAK ILTPSDSNNG 120 GGFSVPRFCA DSIFPLLDLS AEPPVQNLVI KDSQNNAWKF RHIYRGTPRR HLITTGWSRF 180 VNSKRLVAGD SVVFMRKKST GELFVGIRRA VRETVSVWNY PMAVENSTVK RKYGNNCNGG 240 DGKEKEVIEA IETAEKGMAF EVVYYPRTGI PDFVVSTEKV EDSLSFCWSV GMRVKMAVET 300 EDSSRTTWFL GTISSMTSSG GVPGGDSPWR MLERSSGRAR GGEAKCHRWV DAGQGLGLGA 360 RLQGKGVSMH GRTPLPVVAG NCLKYDLIDW DSYDNSLDWT LNCYFLVPLP C*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSAYATHTDP SIWRATAGAA VEIPTVNSRV YYFPQGHLEH SSPVRNNNIL LKTHLISCQV  60
LDVSLLSDSS FDQPFAKLSL LPLQSHGQHV ITDNVEKREL DESDVVSFAK ILTPSDSNNG  120
GGFSVPRFCA DSIFPLLDLS AEPPVQNLVI KDSQNNAWKF RHIYRGTPRR HLITTGWSRF  180
VNSKRLVAGD SVVFMRKKST GELFVGIRRA VRETVSVWNY PMAVENSTVK RKYGNNCNGG  240
DGKEKEVIEA IETAEKGMAF EVVYYPRTGI PDFVVSTEKV EDSLSFCWSV GMRVKMAVET  300
EDSSRTTWFL GTISSMTSSG GVPGGDSPWR MLERSSGRAR GGEAKCHRWV DAGQGLGLGA  360
RLQGKGVSMH GRTPLPVVAG NCLKYDLIDW DSYDNSLDWT LNCYFLVPLP C*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-96	ARF family protein