PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002214.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 303aa    MW: 34309.9 Da    PI: 6.9042
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002214.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.4e-182370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd  l+++++ +G g+W++ a + g++Rt+k+c++rw++yl
      Oeu002214.1 23 RGPWTVEEDFTLINYIAHHGEGRWNSLATCAGLRRTGKSCRLRWLNYL 70
                     89********************************************97 PP
2Myb_DNA-binding47.73.6e-1576119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T eE+  +++++ ++G++ W++Ia++++ gRt++++k++w++
      Oeu002214.1  76 RGNLTLEEQVMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      7899******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEHHVKGGGS YNQSEEELME LRRGPWTVEE DFTLINYIAH HGEGRWNSLA TCAGLRRTGK  60
SCRLRWLNYL HPDVRRGNLT LEEQVMILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKHAKQLKC DVNSKQFKDN LRYLWMPRLV ERIQAGAAST GPTVGTFSTT TATNNHSGTI  180
TAANYHLNKT NLDMGSSRMV LPQPNMAGNF SGGVQINPSN YAPETSCNAA SSDSFGAQVS  240
PVSDLTDCYN YPANHNNNQD YFPPSELSYQ ESFSQGLDFN NSNWMDGGDS WDLDDVWKFL  300
QQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.15e-85MYB family protein