PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002274.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 224aa    MW: 23818.8 Da    PI: 6.2478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002274.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07156200554
                  HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  h+++Er RR+ri ++   L+el+P  +      K + a ++ + v+Y+k L
  Oeu002274.1 156 HSIAERLRRERIAERVRALQELVPGvN------KTDRAVMVDEIVDYVKFL 200
                  99***********************55......9**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MANNPGEDPS DDFLEQILGF PTYGGADTNM AGNDAASLAG APASMMLQLG LGDGSDHLGG  60
VGVGAFHHGG VDASGGFPLG LSLEQGSLGR GGFMKMDDAS GSANRFREDI VDPRASPSIK  120
AGFHGSPMST RVPSMPNPPV IRPRVRARRG QATDPHSIAE RLRRERIAER VRALQELVPG  180
VNKTDRAVMV DEIVDYVKFL RLQVKSHRYS VNDIDFERLD AAP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-32bHLH family protein