PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002302.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 210aa MW: 24189.3 Da PI: 8.0574

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002302.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	79.3	2.7e-25	9	56	1	48
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr+g+lKKA+ELSvLCdae+ viifs +gk++e Oeu002302.1 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVIIFSAHGKIFE 56 79*******************************************998 PP
2	K-box	55.8	2e-19	80	173	7	99
K-box 7 ks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ +++++ l+ e++kLk ei+ Lq+ +R + G + +s++l e++ Le++Le + ++Rs K+++++++i+ l++ke+ l+ +n++L+ k++ Oeu002302.1 80 EQvVKDKEVVDLKDEISKLKLEIDVLQKGIRFIFGGGNDSMTLDEMNVLEKHLELWMCHVRSAKMDIMFQEIQLLKNKEEILKAANEYLQYKMN 173 3348899999********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MARGKIQMKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD AEIGVIIFSA HGKIFEQASK 60 GAMQGLIERY MKNNRGTQAE QVVKDKEVVD LKDEISKLKL EIDVLQKGIR FIFGGGNDSM 120 TLDEMNVLEK HLELWMCHVR SAKMDIMFQE IQLLKNKEEI LKAANEYLQY KMNEQYGIDS 180 IAPMLTDIEY PLMTNNQFPL TIQNEIYQF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71692.1	7e-69	MIKC_MADS family protein