PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002542.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 156aa    MW: 16944.8 Da    PI: 7.5043
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002542.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.9e-054264123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C+ Cg+ F ++  L  H++ H
  Oeu002542.1 42 FSCNFCGRKFYSSQALGGHQNAH 64
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MDYEANTSLS LSSLKDKLNL NLVLDPLSSS SSSSPLEPVR VFSCNFCGRK FYSSQALGGH  60
QNAHKLERTL ARKSKELCSA VKPHAGIDQL QPSSGGSAGG RSRLPGPLIG VDEQGHAGRF  120
NSDMNYGRRN YWNDDYNKGE SVEEELGQLD LTLRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.12e-19C2H2 family protein