PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002550.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 132aa MW: 15112.8 Da PI: 10.5971

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002550.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	37.4	4.4e-12	3	30	29	56
HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 29 ereeLAkklgLterqVkvWFqNrRakek 56 +++ L+ +l+L+ rqV vWFqNrRa++k Oeu002550.1 3 QKQTLSVRLNLKPRQVEVWFQNRRARMK 30 7899**********************99 PP
2	HD-ZIP_I/II	83.4	3.2e-27	3	67	28	92
HD-ZIP_I/II 28 rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +K++l+ +L+l+prqv+vWFqnrRAR+k+kq+E+dye+Lk+++++l+een+rL+ke eL++++k Oeu002550.1 3 QKQTLSVRLNLKPRQVEVWFQNRRARMKLKQTEMDYEFLKKHCERLNEENRRLNKELVELQSAVK 67 89***********************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence
MVQKQTLSVR LNLKPRQVEV WFQNRRARMK LKQTEMDYEF LKKHCERLNE ENRRLNKELV 60 ELQSAVKVEQ TPPKPPFVIQ IPKTAIATLT ICPSCEKIGK NRGGGKEAAA ADVMEVVHIP 120 KQKHNGLKLM I*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	25	33	RRARMKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	9e-34	HD-ZIP family protein