PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002551.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 244aa MW: 27820.8 Da PI: 8.4728

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002551.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.3	5.6e-18	88	142	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq+ Le+ F+++ +++ +++ L+ +l+L+ rqV vWFqNrRa++k Oeu002551.1 88 RKKLRLSKEQIILLEDTFKRHTTLNMVQKQTLSVRLNLKPRQVEVWFQNRRARMK 142 678899***********************************************99 PP
2	HD-ZIP_I/II	110.3	1.3e-35	88	179	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+ lLE++F+++++L+ +K++l+ +L+l+prqv+vWFqnrRAR+k+kq+E+dye+Lk+++++l+een+rL+ke eL++++k Oeu002551.1 88 RKKLRLSKEQIILLEDTFKRHTTLNMVQKQTLSVRLNLKPRQVEVWFQNRRARMKLKQTEMDYEFLKKHCERLNEENRRLNKELVELQSAVK 179 69**************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MEDDEDVCNT RLDLGIGLSD FVPKRDRERK NKSVFCLDLS VPLHSSDHAI EGSGSGSGSS 60 NLKVDYEDDK EASKDTVSNE YEDTNYGRKK LRLSKEQIIL LEDTFKRHTT LNMVQKQTLS 120 VRLNLKPRQV EVWFQNRRAR MKLKQTEMDY EFLKKHCERL NEENRRLNKE LVELQSAVKV 180 EQTPPKPPFV IQIPKTAIAT LTICPSCEKI GKNRGGGKEE AAADVMEVVH IPKQKHNGLK 240 LMI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	145	RRARMKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	9e-47	HD-ZIP family protein