PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002572.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 443aa MW: 48852.1 Da PI: 7.2077

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002572.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.2	3.6e-41	131	208	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adls+ak+yhrrhkvCe+hska+ +lv +++qrfCqqCsrfh+l+efDe+krsCrrrLa+hn+rrrk+q+ Oeu002572.1 131 VCQVEDCKADLSKAKNYHRRHKVCEMHSKATRALVGNQMQRFCQQCSRFHALQEFDEGKRSCRRRLAGHNKRRRKSQS 208 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MEARIGSEAQ LYYGLPSTDL RTVGKRRMEW DPNDWKWDGH LFVASRLNPN PSNYQGRQFF 60 PLERAEKEKR ELEKRRKLVV VEDDNLADEG GNLMLNLGGQ GYPMIERNTG NGDGTSGKKT 120 KLAGAATNRA VCQVEDCKAD LSKAKNYHRR HKVCEMHSKA TRALVGNQMQ RFCQQCSRFH 180 ALQEFDEGKR SCRRRLAGHN KRRRKSQSDN VNNNNPLNDN QASGYLLMTL LKILSNMHSN 240 GSNHKDDQDM ISHLLHSLAS QKSLHGETSI SGCPKESQDL LNYLPSLGNS EFLHALLSNS 300 SQGQRPGEQV STIPVDEMLT KDGNLQATNS QRPGVMLSNH GSSPVDAEGV VCSAGRSKLN 360 NFDLNDVYVD TDDGMEVVER SHIPVDLGTD SIEFPSWVQE SHQSSPPQTS GNSDSGSAQS 420 PSSSNGDAQV CRGFLNLGSP SI*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MEARIGSEAQ LYYGLPSTDL RTVGKRRMEW DPNDWKWDGH LFVASRLNPN PSNYQGRQFF  60
PLERAEKEKR ELEKRRKLVV VEDDNLADEG GNLMLNLGGQ GYPMIERNTG NGDGTSGKKT  120
KLAGAATNRA VCQVEDCKAD LSKAKNYHRR HKVCEMHSKA TRALVGNQMQ RFCQQCSRFH  180
ALQEFDEGKR SCRRRLAGHN KRRRKSQSDN VNNNNPLNDN QASGYLLMTL LKILSNMHSN  240
GSNHKDDQDM ISHLLHSLAS QKSLHGETSI SGCPKESQDL LNYLPSLGNS EFLHALLSNS  300
SQGQRPGEQV STIPVDEMLT KDGNLQATNS QRPGVMLSNH GSSPVDAEGV VCSAGRSKLN  360
NFDLNDVYVD TDDGMEVVER SHIPVDLGTD SIEFPSWVQE SHQSSPPQTS GNSDSGSAQS  420
PSSSNGDAQV CRGFLNLGSP SI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	2e-81	SBP family protein