PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu002670.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 113aa MW: 12727.8 Da PI: 10.0632

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu002670.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	73	5.7e-23	13	61	1	49
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal 49 +CaaCk+lrr+Ca+dCv+apyfpa++p+kfa vhk+FGasnv k+l+ Oeu002670.1 13 PCAACKLLRRRCAHDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQVR 61 7********************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
MKESSRKQGT ASPCAACKLL RRRCAHDCVF APYFPADEPQ KFASVHKVFG ASNVNKMLQV 60 RPLPHTHSPS PPLYLYLHTQ RLYEALAGPR TIFPYIYLVE VKSHSVENMK RA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	7e-37	LBD family protein