PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu003094.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 425aa    MW: 46575.1 Da    PI: 5.412
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu003094.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.42e-112644213374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                   lLl+cAe+v+ ++l  a +lL ++ el+sp g++ qR+ ayf+ AL++r+ +s  ++y+ l++  ++  ++++ l+al++++ ++P++kfsh+taNq
  Oeu003094.1  64 GLLLQCAECVAMDNLDDAGQLLPEIAELSSPFGSSAQRVGAYFADALSSRIISSYLGTYSPLTTLYKT--HQQKLLNALQIYNSITPLIKFSHFTANQ 159
                  58*********************************************************988777776..69999*********************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                  aI +a++g ++vH+iD+di+qGlQWp L++ LasR+++  s+RiTg+g+    s + l++tg+rLa+fA++l++pf+f++l  k  +  +l++L +k 
  Oeu003094.1 160 AIQQALDGVDHVHVIDLDIMQGLQWPGLFHILASRSRKIKSIRITGLGQ----SMDLLNSTGQRLAEFASALNIPFQFQPLEGKIGSVKDLNQLGIKL 253
                  *************************************************....***************************86666666799******* PP

         GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                  gE+++V++++  h l+d ++s       +L+l+  l+Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l+++s er++vE++l+g ei+n
  Oeu003094.1 254 GETVVVHWMH--HCLYDITGSDVV----TLRLLSLLRPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLGADSIERHTVEQQLFGCEIRN 344
                  ********99..777766777777....9*********************.789******************************************** PP

         GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +va  g +r+ + + +e+W + l+++GF+pv+l  + a+qa+lll +++++gy++ eesg+l lgWkd +L+++SaW+
  Oeu003094.1 345 IVAVGGPKRTGEVK-VERWGDELTRVGFRPVSLAGNPAAQASLLLGMFPWQGYTLVEESGWLKLGWKDLSLLTASAWQ 421
                  ********998887.9*************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MNSGKRATVD LASEAEDSVK RRRSQLPAAV DLSVSGEKEH EYEEEQLGAS IIEQEDSTGL  60
RLLGLLLQCA ECVAMDNLDD AGQLLPEIAE LSSPFGSSAQ RVGAYFADAL SSRIISSYLG  120
TYSPLTTLYK THQQKLLNAL QIYNSITPLI KFSHFTANQA IQQALDGVDH VHVIDLDIMQ  180
GLQWPGLFHI LASRSRKIKS IRITGLGQSM DLLNSTGQRL AEFASALNIP FQFQPLEGKI  240
GSVKDLNQLG IKLGETVVVH WMHHCLYDIT GSDVVTLRLL SLLRPKLITI VEQDLSHGGS  300
FLGRFVEALH YYSALFDALG DGLGADSIER HTVEQQLFGC EIRNIVAVGG PKRTGEVKVE  360
RWGDELTRVG FRPVSLAGNP AAQASLLLGM FPWQGYTLVE ESGWLKLGWK DLSLLTASAW  420
QFSD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-170GRAS family protein