PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu003265.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 111aa    MW: 12633.3 Da    PI: 6.0543
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu003265.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS71.22e-223109176290
         GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                  fe ++ + k++ ++++++L++++gEal V++    h+l+d +++ ++    +++l++ lsP+v+++veqe+ h ++sFl+r++++l+yys++f+sl a
  Oeu003265.1   3 FELHP-MDKKFGSIDFSMLQIRKGEALSVHWLQ--HSLYDTTGPDRN----TMRLLQCLSPRVITLVEQEIGH-GGSFLDRLASSLHYYSTIFNSLGA 92 
                  99999.799***********************9..999999999988....**********************.789********************* PP

         GRAS 274 klpreseerikvErell 290
                   l ++++  + vE+ ll
  Oeu003265.1  93 FLDSDDSSHHDVEHCLL 109
                  *******9999998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MYFELHPMDK KFGSIDFSML QIRKGEALSV HWLQHSLYDT TGPDRNTMRL LQCLSPRVIT  60
LVEQEIGHGG SFLDRLASSL HYYSTIFNSL GAFLDSDDSS HHDVEHCLLY *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.14e-33GRAS family protein