PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu003474.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family YABBY
Protein Properties Length: 185aa    MW: 20972 Da    PI: 7.8017
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu003474.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY100.92.7e-31131142101
        YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvs 97 
                  +++s seq+Cyv+CnfC+t+lav vP tslfk+vtvrCGhCt+llsvn++ +   +a + hl++s+  +  l+ee ++  +nl +n+ + +++ ts++
  Oeu003474.2  13 HHVSPSEQLCYVHCNFCDTVLAVGVPCTSLFKTVTVRCGHCTNLLSVNMRGFFVPTANQLHLGNSFFSPqnLMEEIRNPPSNLPMNQPNLNESLTSIR 110
                  78999**********************************************************9987654699*************999999888877 PP

        YABBY  98 sekl 101
                    +l
  Oeu003474.2 111 GDEL 114
                  6655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSSSSSAFAP DHHHVSPSEQ LCYVHCNFCD TVLAVGVPCT SLFKTVTVRC GHCTNLLSVN  60
MRGFFVPTAN QLHLGNSFFS PQNLMEEIRN PPSNLPMNQP NLNESLTSIR GDELPKPPVP  120
NRREIINFSM FISFDVLLKW RKRIHTVNTT MFVPFLWPTT LRAYEGAEYF QSQSTYPFQY  180
TVFC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-33YABBY family protein