PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu003705.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family B3
Protein Properties Length: 233aa    MW: 26134.8 Da    PI: 8.8323
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu003705.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.64.8e-181422221697
                  EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-.SSSEE..EEEEE CS
           B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld.grsefelvvkvf 97 
                  +++p +fa+++    +++k + l+d++g++W+v+++ r +  +   l++GW +F+ka+++++gD++vF+ + g ++  l+v+++
  Oeu003705.1 142 VYVPAQFAKDYLP--KSPKYIELQDSDGKKWKVRVNLRPNYHTvRALSTGWANFAKAKKIEVGDTCVFEIIpG-NKPALKVSIY 222
                  689*****99953..36789***************8866665556789*********************8844.4444677765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MTATEVHYPA HNSRNFEVTN YHPENSIPER KEESDDDSLV ILDSLPPKLV ACSDLEQMNY  60
HHGNSILERK EESDDDSLLI LDSLPPKLVG CSLRNPTPCR SALVARHDKR GKKAVNAAGI  120
STLTYPSFTV EMKANLKPQW VVYVPAQFAK DYLPKSPKYI ELQDSDGKKW KVRVNLRPNY  180
HTVRALSTGW ANFAKAKKIE VGDTCVFEII PGNKPALKVS IYHNTGRVPR LL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-10B3 family protein