PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003839.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NAC

Protein Properties

Length: 296aa MW: 33172.7 Da PI: 7.4301

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003839.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.5	1.9e-47	11	146	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee...vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+GfrFhP+d+el+++yL k v+++ + + evd++k+ePwd+p+++ + k+wyf+ + d+kyatg+r+nrat sgyWkatg Oeu003839.1 11 LPAGFRFHPRDDELICDYLMKWVSTSGggggaasgH---GrppLLIEVDLNKCEPWDIPENACVGGKDWYFYNQLDRKYATGSRTNRATISGYWKATG 105 799******************9999777765542...1443699*********7777789**************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 kd++vl+ +g+lvg++ktLvfy+grapkg+kt+W+mhe+rle Oeu003839.1 106 KDRAVLR-RGTLVGMRKTLVFYEGRAPKGRKTSWIMHEFRLE 146 **9.999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MSSLSMVEAK LPAGFRFHPR DDELICDYLM KWVSTSGGGG GAASGHGRPP LLIEVDLNKC 60 EPWDIPENAC VGGKDWYFYN QLDRKYATGS RTNRATISGY WKATGKDRAV LRRGTLVGMR 120 KTLVFYEGRA PKGRKTSWIM HEFRLEGPLA PPKFISPVMV DWVLCRVFNK NRSELCAKQE 180 LGSTLPPLVE PYITFDQVDE QVSCFSILIP NQTNPNFSNL AQMDQDLSTF PHQLGVHSNS 240 NPCYDKKLVT DVLEHVFTRD TMNPNTKGSP SFGEGSAESY LSEVGFQQPP VWNYY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-102	NAC family protein