PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu003871.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 498aa MW: 57262.5 Da PI: 7.6134

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu003871.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.5e-12	53	96	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 Er+RR+++N+++ Lr+++P+ +K+ K +i+e A++YI++Lq Oeu003871.1 53 VSERNRRKKVNEKLYALRSVVPNI-----TKMHKESIVEDAIDYIQKLQ 96 57*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MENISDEYTH CWETNTFFQA EDLQGNLDEE IPTHDSSSQD GTQSSLMANR NIVSERNRRK 60 KVNEKLYALR SVVPNITKMH KESIVEDAID YIQKLQEEER KIQAEISDLE SAETSSKSTI 120 SEFDHDETFS SNPKRLTNES FYDSEGSRSS PIEVLELRVS RMGEKTVVIC LTCSKRTNTM 180 VKLCEIFESL NLKIISANIA AFSDRVLKTV FVQEKEMIKA VESSQNDHVT WHKRGMELSY 240 EVVKLRKVHH HVIRGVKRSY EVVQSPPPRH LRCGTLIRSG SKHRSNYPPT LHTRLIDAYE 300 QMPHTVQMYT RVSHPKALLT DKYPRLGKRQ REEYVEWLSV GHVEGPIFEV NRLTPSMRNL 360 PVQSSTFFTG ENTEKLATYP EKGTHEEDNP MREASEEEVL HNNVTHQKPH HRRRRGARTA 420 ILTERMTQIT AGMRDIAAQN MAMHELLMQA QGHQGYQMSQ GSYSVQEAPV SRSRGHMSQH 480 RERPLEREVG AKATSYM*

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MENISDEYTH CWETNTFFQA EDLQGNLDEE IPTHDSSSQD GTQSSLMANR NIVSERNRRK  60
KVNEKLYALR SVVPNITKMH KESIVEDAID YIQKLQEEER KIQAEISDLE SAETSSKSTI  120
SEFDHDETFS SNPKRLTNES FYDSEGSRSS PIEVLELRVS RMGEKTVVIC LTCSKRTNTM  180
VKLCEIFESL NLKIISANIA AFSDRVLKTV FVQEKEMIKA VESSQNDHVT WHKRGMELSY  240
EVVKLRKVHH HVIRGVKRSY EVVQSPPPRH LRCGTLIRSG SKHRSNYPPT LHTRLIDAYE  300
QMPHTVQMYT RVSHPKALLT DKYPRLGKRQ REEYVEWLSV GHVEGPIFEV NRLTPSMRNL  360
PVQSSTFFTG ENTEKLATYP EKGTHEEDNP MREASEEEVL HNNVTHQKPH HRRRRGARTA  420
ILTERMTQIT AGMRDIAAQN MAMHELLMQA QGHQGYQMSQ GSYSVQEAPV SRSRGHMSQH  480
RERPLEREVG AKATSYM*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	59	RNIVSERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57150.1	5e-67	bHLH family protein