PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu003874.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 238aa    MW: 26770 Da    PI: 4.6595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu003874.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-105596854
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  Er+RR+++N+++  Lr++ P+      +K+ K +i++ A++YI++L
  Oeu003874.1 55 SERNRRKKLNERLYALRSVAPNI-----TKMHKESIVKDAIDYIQKL 96
                 6*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MENISDEYIL DWETNTFLQA EELQPYLDEA IPTHNDSSSQ DGTQSSLMAN KSIVSERNRR  60
KKLNERLYAL RSVAPNITKM HKESIVKDAI DYIQKLHEEE RKIQAEISDL ESAGSSSKST  120
ISEFDHEETF SSNPKRVTSE SFYDSGGSRS SPIEVLEFRV SSMGEKTVVV SLTCSKRSNT  180
MVKLCEMFES LNLEIISENI TAFSDRVLKT VFVQADEKEK DLLKIKIETA IAALNAP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-69bHLH family protein