PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004250.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 150aa    MW: 16272.6 Da    PI: 10.5131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004250.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.78.5e-084080954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  r RR+ri ++   L++l+P       +Kl+ a++L +A++Y+k L
  Oeu004250.1 40 ARHRRERISEKSRILQRLVPGG-----TKLDTASMLDEAIRYVKFL 80
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MKETMYKIAA MQPVDIDPAT VRRPKRRNVR ISDDPQSVAA RHRRERISEK SRILQRLVPG  60
GTKLDTASML DEAIRYVKFL KRQIRQLQQT GNQVAPPCLG DATGSSVAGD WAVATSSSKS  120
PGSFAVSPLA GCAYIFGGHG ADDPHPHLH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09750.18e-46bHLH family protein