PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004265.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 274aa    MW: 31376.5 Da    PI: 8.7873
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004265.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.41.2e-301968150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs +g+lyey+
  Oeu004265.3 19 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSARGRLYEYA 68
                 79***********************************************8 PP
2K-box97.22.5e-3286168385
        K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 
                  +s++ s +ea+a+ +qqe++kL+++i+n+q+++R++lGe+L+ Lsl+eL++Le+++e+++++iRskKnell+++ie++qk+  
  Oeu004265.3  86 SSNNGSISEANAQFYQQEASKLRQQISNMQNQNRNMLGESLGALSLRELKNLETKVERGISRIRSKKNELLFAEIEYMQKRVS 168
                  3444559*************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MALQSDQSRK ISRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALVVFSA  60
RGRLYEYANN SVKETIERYK KACSDSSNNG SISEANAQFY QQEASKLRQQ ISNMQNQNRN  120
MLGESLGALS LRELKNLETK VERGISRIRS KKNELLFAEI EYMQKRVSVL LTMASYRYLA  180
GREVICEGEV DLHHNNQYLR AKIAETERAQ QHMSLMPGNS DYELVQPQPF DARNYLQVNG  240
LQPNDDYPTQ DQPPLQLVLI SKDRPEEVDY LAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-114MIKC_MADS family protein