PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004293.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 229aa MW: 25325.3 Da PI: 8.6001

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004293.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35	2.5e-11	39	83	53	99
EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 53 rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++++r++lt+GW+ Fv+a++L +gD+v+F ++++ +l+++++r+ Oeu004293.1 39 DGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQLLLGIRRA 83 578899***********************..8899999**997 PP
2	Auxin_resp	89.2	7.8e-30	115	180	19	83
Auxin_resp 19 astseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +s+seFv++++k+ ka + ++vs+GmRf+m fete+ss rr++Gt++g+ dldpvrWpnS+Wrs+k Oeu004293.1 115 TSASEFVIPLSKYIKAAYhTRVSIGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVK 180 689********99988689****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MQEPLTGDGK DEKPNSRPLK LDGRPRMRTC TEDLEDPGDG QPKRHLLTTG WSVFVSAKRL 60 VAGDSVLFIW NEKNQLLLGI RRATRPQTVM PSSVLSSDSM HIGLLLTLLL LIVATSASEF 120 VIPLSKYIKA AYHTRVSIGM RFRMLFETEE SSVRRYMGTI TGIGDLDPVR WPNSHWRSVK 180 CWVYKNPASS GFVDFSSGER GLCLCGLQTG FLLASSTSLL VSVDCVCE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	7e-74	ARF family protein