PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004428.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 320aa    MW: 35499.9 Da    PI: 4.8414
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004428.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-113775244
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS
          HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44
                 r +h+e E+rRR++iN++f+ L  l+P++    ++K +Ka+ L
  Oeu004428.1 37 RSKHSETEQRRRSKINERFQILMGLVPES----DQKRDKASFL 75
                 889*************************9....8999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MIRNNAHQDE DEGTPDSSSP GGKRETKRDD KRVNAVRSKH SETEQRRRSK INERFQILMG  60
LVPESDQKRD KASFLLEFLQ ERLQVYEGMS QDWSPEPTKL MPWRSNPEPV GSFIDQSQFA  120
RNGTDHEDNY IVNPKMLNHA QNSLESDSSG DVLCKPTESP HVAANDTILP NIPLQSNLFE  180
DVSCQPSQGS YLDAEQLTPQ SQSQFWVGKS CANESSVPIY ITNEGEELKS ESGEASISRT  240
YSQGLLNNLT SALQSFGVDL SQASISVQLD ICRRANSGST AAILSAKDHE NPSGVNSADF  300
GDIGENNVHP YKRLRADRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-47bHLH family protein