PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004549.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 626aa    MW: 68145.1 Da    PI: 5.1118
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004549.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS340.82.3e-1042656242374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +++L+++Ae v++g+ +laq +Larl+++ sp+g+p+ R+a++ +eAL+  l+ + +  ++++++s+ s    + ++ a+k+fs++sP+l+f+++t+N
  Oeu004549.1 265 IDQLFKAAELVQTGNPALAQGILARLNHQLSPTGKPFFRAAFFCKEALQLLLHTNNNINSSTVTASPFS---LIFKIGAYKAFSDISPVLQFANFTCN 359
                  689**************************************************9555556666777776...************************** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee.Lrv 196
                  qa+le veg +r+Hi+Dfdi++G+QW++L+q+La R++g+psl+iT ++s++++++ el  t+e+L +fA+e+++ fef v+  ++l++ + ++ ++v
  Oeu004549.1 360 QALLEVVEGFDRIHIVDFDIGYGGQWASLMQELALRSGGAPSLKITSFASSSTHDQLELGLTRENLIQFANEINIAFEFVVMNIDALNSGSWSMpFHV 457
                  *********************************************************************************9888888877665479* PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                  +++E++aVnl +     +  ++s+    + vL++vk+lsPk+vv v++ +d+++ +F +++++al+ ys l++sl+a    + ++  k+Er+ll+++i
  Oeu004549.1 458 SKNEVVAVNLPVGSLASY--QLSV----PLVLRFVKQLSPKIVVSVDRGCDRTDLPFPNHIIHALQSYSNLLESLDAV-NVNMDALEKIERFLLQPRI 548
                  ***********9766666..4444....55*********************************************665.45779999*********** PP

         GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +++v+ + ++     e++++Wr  + ++GF+p+++s+++++qa++l+++++++g++ve+++ slvl+W++++L+s+SaWr
  Oeu004549.1 549 EKIVMGRFRS----LEKMQHWRTLFLSSGFSPITFSNFTESQADCLVKRTPVRGFQVEKRQSSLVLCWQRKELISASAWR 624
                  ****998877....999**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    
MPLTFDFEGK GVLDLELLVN KSSCCGRNNF EENCFLNSFC EPISVLDTVR SPSGLTSSST  60
LSSSLGGAGS IPGGGGGAGS TDTADVTAVS GNNTNLSSKW RQDSTATSSN AGADYEVLPV  120
PPSLQIRNIS AITTATPNTE KCSMDEWESV LSESVAASPS QDQSIVRWIV GDVEDPSMGS  180
LNKVYQIGCG PQAAADFEFN GGFGAVDQTF AFDTPQMLIN QNQSQHPTDP SFFMPISYTQ  240
QPEQNLYMPP QAKRHNPGGA IGAIIDQLFK AAELVQTGNP ALAQGILARL NHQLSPTGKP  300
FFRAAFFCKE ALQLLLHTNN NINSSTVTAS PFSLIFKIGA YKAFSDISPV LQFANFTCNQ  360
ALLEVVEGFD RIHIVDFDIG YGGQWASLMQ ELALRSGGAP SLKITSFASS STHDQLELGL  420
TRENLIQFAN EINIAFEFVV MNIDALNSGS WSMPFHVSKN EVVAVNLPVG SLASYQLSVP  480
LVLRFVKQLS PKIVVSVDRG CDRTDLPFPN HIIHALQSYS NLLESLDAVN VNMDALEKIE  540
RFLLQPRIEK IVMGRFRSLE KMQHWRTLFL SSGFSPITFS NFTESQADCL VKRTPVRGFQ  600
VEKRQSSLVL CWQRKELISA SAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-164GRAS family protein