PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004683.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 259aa    MW: 29065.1 Da    PI: 6.6645
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004683.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH474.4e-1580126354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r+h+e+E+rRRdriN  +++Lr+l+Pk+     +K++Ka+ L ++ve++k+L
  Oeu004683.2  80 RSHSEAEKRRRDRINGQLATLRKLIPKS-----EKMDKAALLGQVVEHVKDL 126
                  78*************************8.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MENCFWPEEY RYASWNQSQS ELESDNPFLV PWLPPNPPPP GEVAASEAAL QFHCYPSSVL  60
PPWPAPFEGV AEDRGGSASR SHSEAEKRRR DRINGQLATL RKLIPKSEKM DKAALLGQVV  120
EHVKDLRQKA KEISKISTIP TDIDEVTIDH LDLEESSMEN NIYIKASVCC DDRPELFAEL  180
NCALKGLRLT ILEADITSLG GRMKAIFALC AKNGMEEKSC FSTLKQSLYI VLNRVAMSSA  240
TSNYRARSKR QRFFYPSH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-46bHLH family protein