PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004786.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 341aa    MW: 38818.4 Da    PI: 9.2767
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004786.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.91.6e-17109210299
                  EEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
           B3   2 fkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                   k+lt+sdv+k+ gr+++pk++ae +        ++++  + l+++d  +  We+++    ++ r++lt+GW++F ++++L +gD+vvF +++ s+ e
  Oeu004786.1 109 AKILTRSDVNKQyGRFCVPKSCAELIfpwidfsAEPPTAFQNLIFKDNFNVAWEFRH---VYGIRHFLTSGWSSFLNSKKLVAGDSVVFIRKH-STNE 202
                  599********99**********888******9777888889***************...777889************************766.8899 PP

                  .EEEEE-S CS
           B3  92 lvvkvfrk 99 
                  l+++++r+
  Oeu004786.1 203 LFIGIRRS 210
                  9****996 PP
2Auxin_resp64.34.5e-22237319283
   Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                  ++ a+++  F+v Y+Pr++t +Fvv++e+ve++l ++ s G R+kma+ete +s++++  Gt+++++      W  S+Wr+L+
  Oeu004786.1 237 ISLADQGISFDVEYYPRVGTRDFVVSAERVEETLFISKSSGLRVKMAVETELFSKKKWfLGTISATTSPCCGTWIASPWRMLQ 319
                  67789999**************************************************9*********999**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MSTTDTEVDP AVWNAIAGSS VQIPPRSSRV YYFPQGHLEN SSATPIQSYG LFLSRPFILC  60
QVSSVQFLSD NSDQVYAKIH LQHLHPRRPR LRDIGNNSEN VQNDLTSYAK ILTRSDVNKQ  120
YGRFCVPKSC AELIFPWIDF SAEPPTAFQN LIFKDNFNVA WEFRHVYGIR HFLTSGWSSF  180
LNSKKLVAGD SVVFIRKHST NELFIGIRRS IHADNMGRWN FPLAKREKRE KLALEAISLA  240
DQGISFDVEY YPRVGTRDFV VSAERVEETL FISKSSGLRV KMAVETELFS KKKWFLGTIS  300
ATTSPCCGTW IASPWRMLQV YVCAVSIFVT VYYEVLVIRL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.12e-69ARF family protein