PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004955.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 602aa MW: 66344.4 Da PI: 6.9473

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004955.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.2e-12	432	478	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h ++Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++L+ Oeu004955.1 432 NHVQAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELE 478 6999********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MGNIELNDDD KSMAVAVLGS KAFDFLISKS VSMECSLMSV GNGKNLQNKL SDLVERTNVA 60 NFSWNYAIFW QLSCSKSGDL VLGWGDGCCR EPREGEESAI SFIFKPRLGN ETQQRMRKMV 120 LQMLHNLFGG IDEDNYAFVL DKITDTEIFF LASMYFSFPK GEGGPGKCFE SGKHIWISDL 180 FKSSIDFYIR SFLAKSAGMQ TVVLIPTDVG VVELGSMQSI PENSELLEIV RSSFSSFSLR 240 NMAEKSVAVT EVTDKINGDG STCSLAIGNE QGVVTKLLGK DSEPGSAQFR INLSVGKLKD 300 RQQDVSASGN RLSFANTVNG FDAARWTQIN NVKPGNPLEI CRPQAPGKKL HKLVNGARDG 360 FQLKNFQQQK SAKMHIDFAG ETSKSTPQPI CVESEHSDVE ALSKEEHASL LEEIKPRKRG 420 RKPAHGREEP LNHVQAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA IAYINELEKK 480 LKDLELEKEK LGSSSGESLS LEAKPNSEMH EPVPSIEIQT VHDKVIVKVS SPLNTHPIAR 540 TVQAIKDAQA TILQSLVVAG SEKVFHTFVV KPQGSEQLTQ ERLIELLSRE SNTSQPSSSV 600 G*

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MGNIELNDDD KSMAVAVLGS KAFDFLISKS VSMECSLMSV GNGKNLQNKL SDLVERTNVA  60
NFSWNYAIFW QLSCSKSGDL VLGWGDGCCR EPREGEESAI SFIFKPRLGN ETQQRMRKMV  120
LQMLHNLFGG IDEDNYAFVL DKITDTEIFF LASMYFSFPK GEGGPGKCFE SGKHIWISDL  180
FKSSIDFYIR SFLAKSAGMQ TVVLIPTDVG VVELGSMQSI PENSELLEIV RSSFSSFSLR  240
NMAEKSVAVT EVTDKINGDG STCSLAIGNE QGVVTKLLGK DSEPGSAQFR INLSVGKLKD  300
RQQDVSASGN RLSFANTVNG FDAARWTQIN NVKPGNPLEI CRPQAPGKKL HKLVNGARDG  360
FQLKNFQQQK SAKMHIDFAG ETSKSTPQPI CVESEHSDVE ALSKEEHASL LEEIKPRKRG  420
RKPAHGREEP LNHVQAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA IAYINELEKK  480
LKDLELEKEK LGSSSGESLS LEAKPNSEMH EPVPSIEIQT VHDKVIVKVS SPLNTHPIAR  540
TVQAIKDAQA TILQSLVVAG SEKVFHTFVV KPQGSEQLTQ ERLIELLSRE SNTSQPSSSV  600
G*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-157	bHLH family protein