PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004973.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 189aa    MW: 21595.1 Da    PI: 7.0981
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004973.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000266284123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C+ C + F++   L  H+++H
  Oeu004973.1 62 YNCSFCRREFRSAQALGGHMNVH 84
                 89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEQVGYWTWA EAESKRKYEL SSHHVLAPAA TATSHGDSWE EQAFAEDASG LLGGCIWPPR  60
SYNCSFCRRE FRSAQALGGH MNVHRRDRAR LRQSPVPQTY ELVLIPCQSF EFHEYPSRSD  120
QIYTFFYHSA NSDSDPDPVR VSDQNQKVSS QKRVSSHGSI SPIIPEHHHK NMVSLSIPLY  180
IYIYIYLC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.16e-27C2H2 family protein