PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004981.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 579aa MW: 64731.8 Da PI: 7.2174

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004981.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4e-13	420	466	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu004981.2 420 NHVEAERQRREKLNRQFCALRAVVPNiS------KMDKASLLGDAISYITQLQ 466 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MAAMVLGIKA IDYLISSSVP AECSLIAMGN DENLHDKLSH LVETPNTANF SWNYAIFWQL 60 SRSKSSGDLV LGWGDGCCRE PYEGEASEGS RIRNTRPEDE TQQRMRKRVL QKLHTLFGGT 120 DEDSYAFGLD KVTDTEMFFL ASMYFSFPKG EGGPGKCFES GKHVWLPDAL NSSQDYCVRS 180 FLSRSAHMQT IVLIPTDVGV VELGSVRSIP ENLHLLKVTG SSFSSFSALN RAEQIESSMV 240 PTDERDENGP NSELVIGNWP KVIPKIFGQD LNSNGAGYRE KLEVQKVEDR PCYKYANGTR 300 FQFAQDGVHG ATWMQNSNVK PGNSTEPSTL QNTAKNLHQM VNETREEFQL NNFQNRKPGK 360 MQIDFTGVTS RSIISRPHKA ESEHSDVEVS YKDDRTRLSD EKRPRKRGRK PANGREAPLN 420 HVEAERQRRE KLNRQFCALR AVVPNISKMD KASLLGDAIS YITQLQKKLK DMESDAGRHE 480 SISRNASTSV SQSNSELQNR VLKIDVQSVH DQVIVRLLCP LDAHPISGVI QAFQDAQVTV 540 LESKIATGTD KVFHTFVVKS QGSEQLTEEK LIQVLSRQ*

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MAAMVLGIKA IDYLISSSVP AECSLIAMGN DENLHDKLSH LVETPNTANF SWNYAIFWQL  60
SRSKSSGDLV LGWGDGCCRE PYEGEASEGS RIRNTRPEDE TQQRMRKRVL QKLHTLFGGT  120
DEDSYAFGLD KVTDTEMFFL ASMYFSFPKG EGGPGKCFES GKHVWLPDAL NSSQDYCVRS  180
FLSRSAHMQT IVLIPTDVGV VELGSVRSIP ENLHLLKVTG SSFSSFSALN RAEQIESSMV  240
PTDERDENGP NSELVIGNWP KVIPKIFGQD LNSNGAGYRE KLEVQKVEDR PCYKYANGTR  300
FQFAQDGVHG ATWMQNSNVK PGNSTEPSTL QNTAKNLHQM VNETREEFQL NNFQNRKPGK  360
MQIDFTGVTS RSIISRPHKA ESEHSDVEVS YKDDRTRLSD EKRPRKRGRK PANGREAPLN  420
HVEAERQRRE KLNRQFCALR AVVPNISKMD KASLLGDAIS YITQLQKKLK DMESDAGRHE  480
SISRNASTSV SQSNSELQNR VLKIDVQSVH DQVIVRLLCP LDAHPISGVI QAFQDAQVTV  540
LESKIATGTD KVFHTFVVKS QGSEQLTEEK LIQVLSRQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	402	410	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-172	bHLH family protein