PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004992.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 396aa    MW: 44087.2 Da    PI: 6.8752
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004992.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09253298454
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  +h  +Er RR+++  af +L++++P a       ++ a+ L  Av YIk+L
  Oeu004992.1 253 NHVDAERHRREKLTRAFCKLQSVVPYA-----STMDRASLLSAAVLYIKEL 298
                  6899**********************9.....68***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MDEFILSSSS LLSASQHQPI SLQQRLQPIL DNQRERWTYA IFWQTSTDDE GCIFLTWGDG  60
FFQGTTVIKE IQGLIVENYS DSHSNIVNDA ERFYVKSLAN PLSLGDGVPG KAFSTGSVVW  120
LSGGNQLRFQ NCERAREAQS HGMQTLVCIP TSNGVVELGS NVIITQNWSV VRQVKCSFES  180
DLYGLGLVSQ KYSKLGTNPD DIDVLSQIQE DAQQKMTEAL PVSKISDSTS QFKTPKKRGR  240
KPSIGRPNVP LINHVDAERH RREKLTRAFC KLQSVVPYAS TMDRASLLSA AVLYIKELKE  300
KVEELESKRM KMKQLEIEVK IVGEDGMIRV QSENTNYPVT RLIDVIRDLE LQVHHASMST  360
VKNLMLQDVV VKVPGGGVIT SEDALRTALV TGLEK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.13e-58bHLH family protein