PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005024.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 350aa MW: 39125.1 Da PI: 8.3275

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005024.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.9e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+d+ + +G+g +W + +++ g++R++k+c++rw++yl Oeu005024.3 14 KGPWSPEEDAKLKDYMENHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	23.8	1.1e-07	69	121	2	48
SSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqkyl 48 g ++++Ed ++ +++ G++ + + +++ g++R++k+c++rw++yl Oeu005024.3 69 GEFSEDEDRIICSLFTSIGSRyyhlliSLIALPQKAGLKRCGKSCRLRWLNYL 121 789********************999999999***********97 PP
3	Myb_DNA-binding	41.6	3e-13	128	170	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++++Ed ++ +++ G++ W+ Ia++++ gRt++++k++w++ Oeu005024.3 128 GEFSEDEDRIICSLFTSIGSR-WSIIAAHLP-GRTDNDIKNYWNT 170 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGRAPCCVKA NVKKGPWSPE EDAKLKDYME NHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNLKHGE FSEDEDRIIC SLFTSIGSRY YHLLISLIAL PQKAGLKRCG KSCRLRWLNY 120 LRPNLKHGEF SEDEDRIICS LFTSIGSRWS IIAAHLPGRT DNDIKNYWNT KLKKKLLELA 180 PFAHLKRPHH GAIYPATANS FLQNSSLQLQ ISAYHSTNKN YYTTTPARVF TGGYESMSNI 240 PSNLLEYATS FTTCSSNSST PTVSSDGSGI DEDFGLLSYF GSGVNENQKL TFPANGYADD 300 SKATNGCFPE NPLDNSIEEI KQLISANNVC NNLNYSGEEI KTEEQVLYY*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGRAPCCVKA NVKKGPWSPE EDAKLKDYME NHGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNLKHGE FSEDEDRIIC SLFTSIGSRY YHLLISLIAL PQKAGLKRCG KSCRLRWLNY  120
LRPNLKHGEF SEDEDRIICS LFTSIGSRWS IIAAHLPGRT DNDIKNYWNT KLKKKLLELA  180
PFAHLKRPHH GAIYPATANS FLQNSSLQLQ ISAYHSTNKN YYTTTPARVF TGGYESMSNI  240
PSNLLEYATS FTTCSSNSST PTVSSDGSGI DEDFGLLSYF GSGVNENQKL TFPANGYADD  300
SKATNGCFPE NPLDNSIEEI KQLISANNVC NNLNYSGEEI KTEEQVLYY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	9e-53	MYB family protein