PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005076.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 190aa    MW: 22166.3 Da    PI: 9.6555
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005076.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.21.5e-34171132102
                   HHHHHHHHHCTG.....GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeilede.....elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 
                   Fl+k+y+ile+e     + ++++sw+++gn f+v+++ ef++ +Lp+yFkh+nf+SF+RQLn+YgFkk+ +++         weF+h++F++g ++l
   Oeu005076.1  17 FLSKTYDILEEEeeaiaNGQRIVSWNSEGNGFIVWNTAEFSEVMLPRYFKHNNFSSFIRQLNTYGFKKTASKR---------WEFQHEKFQRGYRHL 104
                   9*********87666667899************************************************9988.........*************** PP

                   XXXXXXXXX CS
  HSF_DNA-bind  94 lekikrkks 102
                   l++i rkk 
   Oeu005076.1 105 LREITRKKC 113
                   ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MSLKIGQSPR SKCPPPFLSK TYDILEEEEE AIANGQRIVS WNSEGNGFIV WNTAEFSEVM  60
LPRYFKHNNF SSFIRQLNTY GFKKTASKRW EFQHEKFQRG YRHLLREITR KKCEPSAFPA  120
YLKASEEHKS TTLDGNARLL MEENKNLRRE RLELQMQLAH FKTLEVKLLE CLSQCISSHG  180
HQSKVPRPC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-37HSF family protein