PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005080.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 176aa    MW: 19504.4 Da    PI: 8.843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005080.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-111260555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                  + +Er+RR++++s +++L +llP++   +s+  +   + L +A +YIk+Lq
  Oeu005080.1 12 RKTIERNRRNQMKSLYSKLSSLLPHQ---NSREaVPLPDQLGEAANYIKNLQ 60
                 678**********************8...66666*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDQNPSSSKA DRKTIERNRR NQMKSLYSKL SSLLPHQNSR EAVPLPDQLG EAANYIKNLQ  60
ISLEKIKQKK DCLTGVGKCS SSTMGRLKLP NIEIHVIGLA VEVALITGLD CQFMFSEIVR  120
MFHEEGAEVL RASFSIQGET VFHTIHSKLG ETSAPEDEAS RITEKLKKIV YSSVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-35bHLH family protein