PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005327.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 177aa MW: 20259 Da PI: 9.2449

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005327.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.2	8e-20	60	113	2	55
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rk+ ++tk+q ++Lee F++n++++ +++e LA++l+L+ rqV vWFqNrRa++ Oeu005327.1 60 RKKLRLTKDQSRVLEESFRQNHTLNPKQKEGLAEQLKLKPRQVEVWFQNRRARR 113 78889***********************************************96 PP
2	HD-ZIP_I/II	82.2	7.5e-27	60	120	1	61
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEk 61 +kk+rl+k+q+++LEesF+++++L+p++K+ la++L+l+prqv+vWFqnrRAR +k++E+ Oeu005327.1 60 RKKLRLTKDQSRVLEESFRQNHTLNPKQKEGLAEQLKLKPRQVEVWFQNRRARRLKKEVEE 120 69****************************************************9999996 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MEISSDDFSC LELTIAMPGF SSSPSPQSYG NQQALYNDIN SFFSIYRERM EEEYETQNPR 60 KKLRLTKDQS RVLEESFRQN HTLNPKQKEG LAEQLKLKPR QVEVWFQNRR ARRLKKEVEE 120 LRGMNVRPPN ISQQQPAATL TMCPRCERVA TTFLDKGPAT TTSTTPTKII QPSAAC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-44	HD-ZIP family protein